Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865463:139865475:[+] chr22:27069185:27069196:[+] nonBSJ supported Exon

circRNA 5':AGACAAUCCAUGU 3'


            ||| ||| ||


target  3':ACUGC-AGGCACC 5'

 -6.60 1 RIC-seq
chrX:139866230:139866251:[+] chr22:27072098:27072125:[+] nonBSJ supported Exon

circRNA 5':UCCAGCA-AGUCC--ACGUCU--UCCA 3'


            |||||| ||:|| ||:| ||||


target  3':UGGUCGUGUCGGGAGUGUAACCCAGGUG 5'

 -20.70 1 RIC-seq
chrX:139866230:139866260:[+] chr22:27072088:27072125:[+] nonBSJ supported Exon

circRNA 5':UCCAGCA-AGUCC--ACGUCU--UCCAA--CAAAGCCA 3'


            |||||| ||:|| ||:| |||| || |:||


target  3':UGGUCGUGUCGGGAGUGUAACCCAGGUGUCGUGUUGGA 5'

 -26.10 1 RIC-seq