Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865918:139865942:[+] chr7:41750400:41750419:[+] nonBSJ supported Exon

circRNA 5':GUCUUCCAGCCAAUAUAUGUCUUCC 3'


            ||:| |:||| ||||||||


target  3': AGGAACUUGGU----UACAGAAGA 5'

 -16.50 1 RIC-seq
chrX:139865934:139865978:[+] chr7:41750400:41750433:[+] nonBSJ supported Exon

circRNA 5':AUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCC 3'


            || :|| ||| ||||| ||| ||||||||


target  3': ACUCGAGAACUCCUAGGAACUU--GGU--------UACAGAAGA 5'

 -21.30 12 RIC-seq
chrX:139865934:139865978:[+] chr7:41750400:41750434:[+] nonBSJ supported Exon

circRNA 5':AUGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCC 3'


            || :|| ||| ||||| ||| ||||||||


target  3':GACUCGAGAACUCCUAGGAACUU--GGU--------UACAGAAGA 5'

 -21.80 13 RIC-seq
chrX:139865935:139865978:[+] chr7:41750400:41750434:[+] nonBSJ supported Exon

circRNA 5': UGUCUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCC 3'


            || :|| ||| ||||| ||| ||||||||


target  3':GACUCGAGAACUCCUAGGAACUU--GGU--------UACAGAAGA 5'

 -21.80 4 RIC-seq
chrX:139865938:139865978:[+] chr7:41750400:41750430:[+] nonBSJ supported Exon

circRNA 5':CUUCCUGAAGAUCCACGUCUUCCAGAAAAUCCAUGUCUUCC 3'


            ||| ||| ||||| ||| ||||||||


target  3':CGAGAACUCCUAGGAACUU--GGU--------UACAGAAGA 5'

 -21.00 4 RIC-seq