Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865576:139865592:[+] chrX:102100873:102100889:[+] nonBSJ supported Exon

circRNA 5':UCCAGAUCUUCCAGGAA 3'


            || |||||


target  3':CGGGAAAUUCAGUCCUC 5'

 -7.90 1 RIC-seq
chrX:139865599:139865611:[+] chrX:102100873:102100890:[+] nonBSJ supported Exon

circRNA 5':CGUCUUC-----CAGGAA 3'


            |:|:| |||||


target  3':ACGGGAAAUUCAGUCCUC 5'

 -8.70 27 RIC-seq