Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865413:139865455:[+] chr13:46948600:46948632:[-] nonBSJ supported Exon

circRNA 5':UCUCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAGAAAAUCCAC 3'


            ||| :|||: |||: || ||||: |||||||


target  3': GAGGAUCAGGUAC------AGGGA-CG-AGGUU-UUUAGGUA 5'

 -26.40 7 RIC-seq
chrX:139865423:139865455:[+] chr13:46948607:46948632:[-] nonBSJ supported Exon

circRNA 5':UUCCAGAUAAUCCUGAGCUUCCAGAAAAUCCAC 3'


            |||| |||: || ||||: |||||||


target  3': AGGUAC---AGGGA-CG-AGGUU-UUUAGGUA 5'

 -23.40 1 RIC-seq