Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865784:139865829:[+] chr7:131813481:131813534:[-] nonBSJ supported 3UTR

circRNA 5':AGG--UCUUCCAG---------UCAAUC--AGUGUCUUCCAGAAAGAAAUCCAGGUCUU 3'


            || |||||| ||| || |||| ||: ||| ||||


target  3':ACCAAAGAAGGGGUUCCCCCCGAGUAAGACUCACCCACUGUUC--CUUACUA--CAGA 5'

 -15.10 2 RIC-seq
chrX:139866222:139866249:[+] chr7:131831348:131831377:[-] nonBSJ supported CDS

circRNA 5':CCGUG--UCUUCCAGCAAGU--CCACGUCUUC 3'


            |||| ||||| :| || ||||:||||


target  3':AGCACCAAGAAG--UGAUCCACGGUGUAGAAC 5'

 -22.30 4 RIC-seq