Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866223:139866251:[+] chr2:243061152:243061184:[+] nonBSJ supported Exon

circRNA 5':CGUGUCUUCCA--GCAAGUCCAC-GUCUU-CCA 3'


            ||:|||| ||| |||| ||


target  3':CCAUAGAACUUAACGUGAACUCUUCAGAUUGGC 5'

 -14.20 14 RIC-seq
chrX:139866349:139866377:[+] chr2:243061152:243061184:[+] nonBSJ supported Exon

circRNA 5':CGUGUCUUCCA--GCAAAUCCAC-GUCUU-CCA 3'


            ||:|||| ||| |||| ||


target  3':CCAUAGAACUUAACGUGAACUCUUCAGAUUGGC 5'

 -14.20 3 RIC-seq