Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865835:139865861:[+]	chr7:48965203:48965230:[+]	nonBSJ supported	Exon	circRNA 5':CAGUCAGUGUCUUCCAGAAAA--AUCUAC 3' \|\|:\|\|\| \|\|\|\| \|\|\|\| \|:\|:\|\| target 3':UUCGGUC-CAGAC-GUCUAGGAAUGGGUGC 5'	-19.70	1	RIC-seq
chrX:139865996:139866041:[+]	chr7:48965251:48965296:[+]	nonBSJ supported	Exon	circRNA 5':CAGUAACCUCCCAGUCUUCCAGAAAAUCCACG---UCUUC-CCAACAAUC 3' \|\|\| \|\|\| \|\|\|\| \|\|\|\|\| \|\| \|\| \|\|\|\| \|\|: target 3':AUCAGGGGAAGGUC----GGUCUCCGAACAAACGAAGUAGUGGUUUUUGA 5'	-24.00	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr7:48965251:48965296:[+]	target	-	chr7:48965281-48965282	G>T	PACA-CA	ICGC