Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866057:139866102:[+] chr20:42281793:42281847:[+] nonBSJ supported Exon

circRNA 5':AUUUGGG------UCU--UCCU-GAAAAUCUACGUCUUCCAAAAAAGCCAUGUCU 3'


            |||||| ||: |||: ||| || :|| :|||::||


target  3':GAAACCCUCGAAAAGGAAAGGGUCUUGAAACAUCAUCGGGCUAACGUGGUGUAGU 5'

 -24.20 4 RIC-seq