Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865831:139865869:[+]	chr4:2240522:2240579:[-]	nonBSJ supported	CDS	circRNA 5':CAG-UCAGUCAGUGUCUUCC-----------------AGAAAAA--UCUACGUCUUCCA 3' \|\| \|\|\|: :\|\|:\|\|\| \|:\|\| \|\|\| \|\|\|\|\| \| target 3':UUCAAGUUUACUACGGAAAACAAAAUAAUUAACUAAAUUUUGAUUGAGAA-CAGAACGA 5'	-10.70	1	RIC-seq
chrX:139865843:139865860:[+]	chr4:2240571:2240592:[-]	nonBSJ supported	CDS	circRNA 5': GUCUU-CCAG--AAAAAUCUA 3' \|\|\|\|\| \| \|\| \|\|\|\|\| target 3':ACAGAACGACAUAUUAUUAGAA 5'	-6.40	1	RIC-seq