Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866774:139866814:[+]	chr19:20228860:20228907:[+]	nonBSJ supported	CDS	circRNA 5':CAGUG-UGCUGAUCUUCUG-ACAUUC---AGGUC---UUCCAGUGUCUG 3' \|\|: \|\|\|: \|: \|\|\|\|: \|\|\|\|\| \|\|\|\| \|\|\|\|\|\|\|:\|\|\| target 3':UUCGAAACGG-UGUAAGAUAUGUAAACUUUCCAAAAAAAGGUCAUAGAG 5'	-30.30	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866774:139866814:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC