Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866548:139866594:[+]	chr2:127315038:127315084:[-]	nonBSJ supported	Exon	circRNA 5':ACGUCUUCCAGAAAAUAU-AUGUCUUCCAAC--UAAGCUACGUCUUCCAA 3' \|\|\|\|\|:\| \|\|\|\|\|: \|\|\| :\|\|\| \|\|\|\|: \|\| target 3':AGCAGAGGAACCCAUAGGCUACAGGU-GUUACAGUUCAA--CAGAGAGUC 5'	-21.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866548:139866594:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC