Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865372:139865399:[+] chrX:70240152:70240179:[-] nonBSJ supported Exon

circRNA 5':AACAACUCCGGGUCUUCCAG-CGAC-UUCA 3'


            || ||: |: :| | ||| ||| |||


target  3': UGAUGGUGUGUAAUACGUCAGCUCAAAG 5'

 -10.80 1 RIC-seq
chrX:139865868:139865891:[+] chrX:70240154:70240173:[-] nonBSJ supported Exon

circRNA 5':CACCAAAUCCAGGUCUUCCAGUCA 3'


            |||| || :| | |||||


target  3':AUGGU----GUGUAAUACGUCAGC 5'

 -11.80 2 RIC-seq
chrX:139865967:139866005:[+] chrX:70240149:70240181:[-] nonBSJ supported Exon

circRNA 5':UCCAUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUC 3'


            |||: ||| | |||: || ||| |||


target  3':GGGUGAU---GGUGUGUAA--UACGUCAGCUCAAAGGA 5'

 -14.50 1 RIC-seq
chrX:139866454:139866478:[+] chrX:70240263:70240285:[-] nonBSJ supported Exon

circRNA 5':AGGUACGUCUUCCAACAAAGGUAUG 3'


            ||| :|||:|| ||||||


target  3':ACCA--UAGAGGGGACGGUCCAUAG 5'

 -20.40 17 RIC-seq
chrX:139866473:139866495:[+] chrX:70240263:70240284:[-] nonBSJ supported Exon

circRNA 5': GGUAUGUCUUCCAACAAAGGUAC 3'


            ||| :|||:|| |||||


target  3':ACCA--UAGAGGGGACGGUCCAUA 5'

 -18.90 2 RIC-seq
chrX:139866509:139866535:[+] chrX:70240149:70240173:[-] nonBSJ supported Exon

circRNA 5':UCCACGUCUUCCA-ACCAA--GCCAUGUCU 3'


            |||| ||| || || |||


target  3':GGGUGAU---GGUGUGUAAUACGU--CAGC 5'

 -11.00 1 RIC-seq
chrX:139866530:139866553:[+] chrX:70240265:70240285:[-] nonBSJ supported Exon

circRNA 5':AUGUCUUCCAGAAAAUCCAC--GUCU 3'


            |:|||:|| ||| :||


target  3':CAUAGAGGGGAC----GGUCCAUAG 5'

 -11.60 1 RIC-seq
chrX:139866671:139866703:[+] chrX:70240149:70240176:[-] nonBSJ supported Exon

circRNA 5':UCCACGUCUUCCA-GCAUCUCUGUGUCUUCCAGC 3'


            |||| ||| :||| |:||: || ||


target  3':GGGUGAU---GGUGUGUA---AUACGUCAGCUCA 5'

 -15.20 1 RIC-seq
chrX:139866675:139866697:[+] chrX:70240266:70240285:[-] nonBSJ supported Exon

circRNA 5':CGUCUUCCA-GCAUCUCUGUGUCU 3'


            ||||:|| || ||:||


target  3':AUAGAGGGGACGGUC---CAUAG 5'

 -15.30 9 RIC-seq
chrX:139866675:139866697:[+] chrX:70240267:70240285:[-] nonBSJ supported Exon

circRNA 5':CGUCUUCCA-GCAUCUCUGUGUCU 3'


            ||||:|| || ||:||


target  3': UAGAGGGGACGGUC---CAUAG 5'

 -14.80 1 RIC-seq