Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865417:139865443:[+] chrX:118557753:118557777:[+] nonBSJ supported Exon

circRNA 5':AAGGUCUUCCAGAUAAUCCUGAGCUUC 3'


            ||| | ||||| ||| ||::


target  3':CUCCCGUUAC-CUAUUCGGAG-CGGGA 5'

 -12.80 13 RIC-seq
chrX:139865418:139865443:[+] chrX:118557753:118557775:[+] nonBSJ supported Exon

circRNA 5':AGGUCUUCCAGAUAAUCCUGAGCUUC 3'


            ||: ||||| ||| ||::


target  3':CCCGUUAC--CUAUUCGGAG-CGGGA 5'

 -12.50 1 RIC-seq
chrX:139865706:139865738:[+] chrX:118557808:118557835:[+] nonBSJ supported Exon

circRNA 5':CCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGAA 3'


            |||:| ||| || |||| |:||| |


target  3':UGUUUAACACGUC----AGCUCAA-AGGGUGUA 5'

 -11.70 1 RIC-seq