Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866621:139866648:[+] chrX:131714174:131714196:[-] nonBSJ supported Exon

circRNA 5':GGUCUUCCA-GCAUCUCCAGGGCUUCCAG 3'


            ||| ||| || ||||| |||


target  3':ACAGUAGGAACGC----GUCCCC--GGUA 5'

 -17.70 1 RIC-seq
chrX:139866621:139866664:[+] chrX:131714174:131714207:[-] nonBSJ supported Exon

circRNA 5':GGUCUUCCA-GCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUCC 3'


            ||| ||| || ||||| ||| |||| :|||||


target  3':ACAGUAGGAACGC----GUCCCC--GGU-----ACGAUUAGAAGA 5'

 -28.30 1 RIC-seq