Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865991:139866054:[+] chr21:35013761:35013819:[-] nonBSJ supported Intron

circRNA 5':UCUUCCAGUAACCUCCCAGUCU---UCCAGAAAAUCCACGUCUUCCCAACAAUCCAAGUCUU-CCGGA 3'


            |:| ||:| ||| ||| ||||| |||: |||| |||| |||||| || :


target  3': GGAUGUUAGUUUUGGG-CAGUUCCAGGUCCUUUGAC------AGGGAGUUUAGA-UCAGAAUGGGUG 5'

 -31.10 1 RIC-seq
chrX:139865995:139866054:[+] chr21:35013765:35013819:[-] nonBSJ supported Intron

circRNA 5':CCAGUAACCUCCCAGUCU---UCCAGAAAAUCCACGUCUUCCCAACAAUCCAAGUCUU-CCGGA 3'


            ||:| ||| ||| ||||| |||: |||| |||| |||||| || :


target  3': GUUAGUUUUGGG-CAGUUCCAGGUCCUUUGAC------AGGGAGUUUAGA-UCAGAAUGGGUG 5'

 -29.80 1 RIC-seq