Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865818:139865842:[+] chr21:35247772:35247792:[+] nonBSJ supported CDS

circRNA 5':AAUCCAGGUCUUCCAGUCAGUCAGU 3'


            ||||| :|||||:| |||||


target  3':CUAGGU----GAGGUCGGCCAGUCU 5'

 -23.90 1 RIC-seq
chrX:139865820:139865842:[+] chr21:35247772:35247797:[+] nonBSJ supported CDS

circRNA 5':UCCAGG-UCU--UCCAGUCAGUCAGU 3'


            || || ||: |||||:| |||||


target  3':CGGACCUAGGUGAGGUCGGCCAGUCU 5'

 -24.10 25 RIC-seq
chrX:139865827:139865842:[+] chr21:35247772:35247787:[+] nonBSJ supported CDS

circRNA 5':CUUCCAGUCAGUCAGU 3'


            ||||||:| |||||


target  3':UGAGGUCGGCCAGUCU 5'

 -19.70 1 RIC-seq