Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866189:139866217:[+] chr14:85995485:85995507:[-] nonBSJ supported Exon

circRNA 5':UAGCUUCCAAAAAAUCCGGGUCUUCCAGG 3'


            |||||||| |||| :||: ||:


target  3':UUCGAAGGUA----AGGCGUAGGU-GUU 5'

 -22.60 1 RIC-seq
chrX:139866189:139866217:[+] chr14:85995485:85995508:[-] nonBSJ supported Exon

circRNA 5':UAGCUUCCAAAAAAUCCGGGUCUUCCAGG 3'


            |||||||| |||| :||: ||:


target  3':UUCGAAGGUA----AGGCGUAGGU-GUUA 5'

 -22.40 2 RIC-seq
chrX:139866331:139866364:[+] chr14:85995485:85995508:[-] nonBSJ supported Exon

circRNA 5':CAGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAA 3'


            |:| |||||| ||||::||: :|||


target  3': UUC-GAAGGUA----AGGCGUAGG----UGUUA 5'

 -20.40 16 RIC-seq