Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865974:139866008:[+] chr7:97845077:97845110:[-] nonBSJ supported 3UTR

circRNA 5':CUUCCAGAAAAUCCAUGUCUUCCAGUAACC-UCCCA 3'


            |||||| |||: |: |||| || ||||


target  3':CAAGGUCCACC-GGUGGUGGCGGUCCG-GGAAGGGC 5'

 -28.70 1 RIC-seq
chrX:139865984:139866016:[+] chr7:97845078:97845109:[-] nonBSJ supported 3UTR

circRNA 5':AUCCAUGUCUUCCAGUAACCUCCCAG--UCUUCCA 3'


            |||| || ||| : ||| |||| :|||||


target  3':AAGGUCCACC-GGUGG-UGGC-GGUCCGGGAAGGG 5'

 -24.40 1 RIC-seq