Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865433:139865474:[+] chr6:30459411:30459432:[+] nonBSJ supported CDS

circRNA 5':UCCUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUG 3'


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target  3':UGGACUCGAGA-------------AGAAGG------AGGUA 5'

 -23.40 14 RIC-seq
chrX:139866349:139866361:[+] chr6:30458222:30458234:[+] nonBSJ supported CDS

circRNA 5':CGUGUCUUCCAGC 3'


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target  3':ACACAGAAGGUCC 5'

 -19.90 1 RIC-seq
chrX:139866349:139866375:[+] chr6:30458212:30458234:[+] nonBSJ supported CDS

circRNA 5':CGUGUCUUCCAGCAAAUCCACGUCUUC 3'


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target  3':ACACAGAAGGUCCAUCCG----AGAGA 5'

 -20.10 8 RIC-seq