Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866599:139866629:[+] chr6:30867366:30867402:[+] nonBSJ supported Intron

circRNA 5': UCCA-UGUCU-UCCUAUA--UCUCCA-GGUCUUCCA 3'


            |||| ||||| ||||||| ||||| : :|||||


target  3':CAGGUCACAGAUAGGAUAUAAAGAGGGGUGGGAAGGG 5'

 -35.20 1 RIC-seq
chrX:139866599:139866640:[+] chr6:30867361:30867402:[+] nonBSJ supported Intron

circRNA 5': UCCA-UGUCU-UCCUAUA--UCUCCAGGUCUUCCAGCA-UCUCCAGG 3'


            |||| ||||| ||||||| ||||| ||| | ||:|||:|


target  3':CAGGUCACAGAUAGGAUAUAAAGAGG-------GGUGGGAAGGGGUUCC 5'

 -39.50 1 RIC-seq