Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866637:139866656:[+] chr1:28708639:28708663:[+] nonBSJ supported Intron

circRNA 5':CAGGG-CU----UCCAGCAUCUGCU 3'


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target  3':UUUCCAGAUUAUAGGUCGUAGAUGU 5'

 -24.80 1 RIC-seq
chrX:139866647:139866666:[+] chr1:28708647:28708673:[+] nonBSJ supported Intron

circRNA 5':AGCAUCUG-CUC--GUCU----UCCAA 3'


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target  3':ACGUAGACUGUUUCCAGAUUAUAGGUC 5'

 -18.00 1 RIC-seq