5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865898:139865928:[+] | chrX:139796340:139796370:[+] | nonBSJ supported | 3UTR |
circRNA 5':AUCUUCCGGAAAAAAUCCAGGUCUUCCAGCC 3' |||| ||||||| ||| target 3':CAGAAACACAGUACUACGCCCAGAAGUUCGA 5' |
-15.70 | 2 | RIC-seq |
| chrX:139866008:139866049:[+] | chrX:139795992:139796034:[+] | nonBSJ supported | 3UTR |
circRNA 5':AGUCUUCCAGAAAAUCCAC-GUCUUCCCAACAAUCCAAGUCUU 3' |||| |||:| ||||||| target 3':ACAGACACACAGUAUCAUCUCAGGAAUACCCCCCCGUUCAGAC 5' |
-14.30 | 1 | RIC-seq |
| chrX:139865379:139865408:[+] | chrX:139795688:139795715:[+] | nonBSJ supported | CDS |
circRNA 5':CCGGGUCU---UCCAGCGACUUCAAGUCUUCCA 3' |::|||| ||||| | ||||||::|| target 3':UGUUCAGACGAAGGUC-C----GUUCAGGGGGA 5' |
-27.80 | 1 | RIC-seq |
| chrX:139865380:139865385:[+] | chrX:139795734:139795739:[+] | nonBSJ supported | CDS |
circRNA 5':CGGGUC 3' |||| target 3':UCCCAC 5' |
-6.20 | 1 | RIC-seq |
| chrX:139865390:139865441:[+] | chrX:139795654:139795722:[+] | nonBSJ supported | CDS |
circRNA 5':AGC-GACUUCAAGUCU---UCCAAUAAUCUCAAGGUCUUCC---------------------AGAUAAUCCUGAGCU 3' || ||| ||||||| |||| |:|||::|| |||:||: || :| target 3':ACGCCUGU-GUUCAGACGAAGGUCCG------UUCAGGGGGAAUCAUAGAUGUUUAUUAUUAUCUGUUGUGAA-UGU 5' |
-31.50 | 1 | RIC-seq |
| chrX:139865427:139865447:[+] | chrX:139795699:139795719:[+] | nonBSJ supported | CDS |
circRNA 5':AGAUAAUCCUGAGCUUCCAGA 3' ||:| |||||||| target 3':CCUGUGUUCAGACGAAGGUCC 5' |
-16.70 | 1 | RIC-seq |
| chrX:139865941:139865979:[+] | chrX:139795688:139795724:[+] | nonBSJ supported | CDS |
circRNA 5':CCUGAAGAUCCACGUCU---UCCAGAAAAUCCAUGUCUUCCA 3' ||| ||: || |||| ||||| || |||::|| target 3':UGACGCCUGUGUUCAGACGAAGGUCC-----GUUCAGGGGGA 5' |
-26.00 | 1 | RIC-seq |
| chrX:139866056:139866103:[+] | chrX:139793796:139793821:[+] | nonBSJ supported | CDS |
circRNA 5':AAUUUGGGUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCUU 3' |||||: |||| || |||||||| target 3':GUAAACU----------------------AGGUCCUUAAGGUACAGAU 5' |
-17.30 | 2 | RIC-seq |
| chrX:139866143:139866183:[+] | chrX:139795685:139795719:[+] | nonBSJ supported | CDS |
circRNA 5':AGACUAUCCA-UGUCUUCCAGAAAAUCCUUGUCUUCCCUUAA 3' ||| || ||||||| || ||| :|||||| target 3':CCUGUGUUCAGAC-GAAGGUCCGUU-----CAG-GGGGAAUC 5' |
-25.00 | 2 | RIC-seq |
| chrX:139866171:139866187:[+] | chrX:139795681:139795696:[+] | nonBSJ supported | CDS |
circRNA 5':UGUCUUCCCUUAA-AUCU 3' ||| :|||||| ||| target 3':UCAG-GGGGAAUCAUAG 5' |
-13.40 | 2 | RIC-seq |
| chrX:139866211:139866242:[+] | chrX:139793785:139793815:[+] | nonBSJ supported | CDS |
circRNA 5':UUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCA 3' |||||||| |||:||||| ||| target 3':UAGGUCCUUAAGGUACAGAUGCUUAAAAAGG 5' |
-32.40 | 1 | RIC-seq |
| chrX:139866339:139866357:[+] | chrX:139795926:139795944:[+] | nonBSJ supported | CDS |
circRNA 5':CCAGGAAAUCCGUGUCUUC 3' ||| || ||||:||: target 3':CGUCAUGUAUGCACGGAGA 5' |
-14.30 | 2 | RIC-seq |
| chrX:139866404:139866428:[+] | chrX:139795831:139795857:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAGCCUACU--UGUGUCUU 3' |||| |||| |:||||| target 3':AACAGCCACACGGAAACCUAUACAGAC 5' |
-16.20 | 1 | RIC-seq |
| chrX:139866419:139866426:[+] | chrX:139795762:139795769:[+] | nonBSJ supported | CDS |
circRNA 5':CUUGUGUC 3' |||||| target 3':AAACACAA 5' |
-6.10 | 1 | RIC-seq |
| chrX:139865339:139865354:[+] | chrX:139854477:139854491:[+] | nonBSJ supported | Exon |
circRNA 5':GGGUUUCCGAUGGCAC 3' ||:| | || |||| target 3':ACCGACGUCU-CCGUU 5' |
-11.70 | 1 | RIC-seq |
| chrX:139865339:139865360:[+] | chrX:139854501:139854523:[+] | nonBSJ supported | Exon |
circRNA 5':GGGUUUCCG-AUGGC-ACCUGUGU 3' ||||| | |||:| || :||| target 3':GUCAAAAACAUACUGUUGUGCAC 5' |
-11.80 | 3 | RIC-seq |
| chrX:139865339:139865368:[+] | chrX:139854274:139854304:[+] | nonBSJ supported | Exon |
circRNA 5':GGGUUUCCGAUGGCAC-CU-GUGUCAAGGUCU 3' ||: || ||| || | | ||||||||| target 3':UUCGCUAGC-ACCUUGAGUCCUCAGUUCCAGU 5' |
-22.10 | 1 | RIC-seq |
| chrX:139865339:139865370:[+] | chrX:139854420:139854456:[+] | nonBSJ supported | Exon |
circRNA 5': GGGUUUC--CGA-UGGCACCU--GUGUCAAGGUCUUC 3' |:|| |:| || |||: :||| ||||||| target 3':UCUCAUCUUUGUUCACAUUGGGUUUACAA--CCAGAAGA 5' |
-20.70 | 1 | RIC-seq |
| chrX:139865339:139865376:[+] | chrX:139854415:139854456:[+] | nonBSJ supported | Exon |
circRNA 5': GGGUUUC--CGA-UGGCACCU--GUGUCAAGGUCUUCCAACAA 3' |:|| |:| || |||: :||| ||||||| ||| target 3':UCUCAUCUUUGUUCACAUUGGGUUUACAA--CCAGAAGAGUGUC 5' |
-24.40 | 1 | RIC-seq |
| chrX:139865339:139865376:[+] | chrX:139854416:139854456:[+] | nonBSJ supported | Exon |
circRNA 5': GGGUUUC--CGA-UGGCACCU--GUGUCAAGGUCUUCCAACAA 3' |:|| |:| || |||: :||| ||||||| ||| target 3':UCUCAUCUUUGUUCACAUUGGGUUUACAA--CCAGAAGAGUGU 5' |
-24.20 | 3 | RIC-seq |
| chrX:139865340:139865353:[+] | chrX:139854353:139854367:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCCGAUGGCA 3' ||:|: |:| ||| target 3':UUCGAGAGUUUCCGC 5' |
-10.90 | 5 | RIC-seq |
| chrX:139865340:139865354:[+] | chrX:139816107:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCAC 3' |||: | ||||| target 3':ACCAGUGAUCCACCGUU 5' |
-11.50 | 3 | RIC-seq |
| chrX:139865340:139865365:[+] | chrX:139854356:139854395:[+] | nonBSJ supported | Exon |
circRNA 5': GGU-------------------UUCCGAUGGCACCUGUGUCAAGG 3' ||| ||||:| :|| | ||||:| target 3':ACCACUGAACUUGAACGUAUAGCAAGGUU-UCG-----AGAGUUUC 5' |
-12.40 | 2 | RIC-seq |
| chrX:139865340:139865366:[+] | chrX:139816096:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGUCAAGGU 3' |||: | ||||| :|||: ||| target 3':ACCAGUGAUCCACCGUUUGCACGUGUCC 5' |
-20.30 | 1 | RIC-seq |
| chrX:139865340:139865366:[+] | chrX:139854365:139854395:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC--GAUG-GCACC-UGUGUCAAGGU 3' ||| | :|: ||| :|| :|||:| target 3':ACCACUGAACUUGAACGUAUAGCAAGGUUUC 5' |
-10.80 | 4 | RIC-seq |
| chrX:139865340:139865367:[+] | chrX:139816093:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUC 3' |||: | ||||| :|||: || ||: target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCGU 5' |
-21.00 | 4 | RIC-seq |
| chrX:139865340:139865368:[+] | chrX:139854297:139854322:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCCGAUG-GCACCUGUGUCAAGGUCU 3' ||| ||: ||| |||| |:|| target 3':ACCA----CUGAACGUCAACACUUCGCUAG 5' |
-16.20 | 1 | RIC-seq |
| chrX:139865340:139865370:[+] | chrX:139854359:139854395:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC--GAUG-GCACC-UGUGUCAAGG-UCUUC 3' ||| | :|: ||| :|| :|||:| |||: target 3':ACCACUGAACUUGAACGUAUAGCAAGGUUUCGAGAGU 5' |
-14.40 | 1 | RIC-seq |
| chrX:139865340:139865371:[+] | chrX:139854359:139854395:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC--GAUG-GCACC-UGUGUCAAGGUCUUCC 3' ||| | :|: ||| :|| :|||:|: :|| target 3':ACCACUGAACUUGAACGUAUAGCAAGGUUUCGAGAGU 5' |
-14.60 | 1 | RIC-seq |
| chrX:139865340:139865372:[+] | chrX:139816086:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUU---CCA 3' |||: | ||||| :|||: || ||: || target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCGUGCUUCGG 5' |
-21.10 | 2 | RIC-seq |
| chrX:139865340:139865372:[+] | chrX:139854379:139854413:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCCGAUGGCACCU--GUGUCAAGGUCUUCCA 3' ||| ::|| ||| | |: ||| | target 3':UCCAUCGUUCUUUGUCCUACCACUGAACUUGAACG 5' |
-7.60 | 1 | RIC-seq |
| chrX:139865340:139865373:[+] | chrX:139854378:139854413:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCCGAUGGCACCU--GUGUCAAGGUCUUCCAA 3' ||| ::|| ||| | |: ||| || target 3':UCCAUCGUUCUUUGUCCUACCACUGAACUUGAACGU 5' |
-8.30 | 1 | RIC-seq |
| chrX:139865340:139865380:[+] | chrX:139854335:139854395:[+] | nonBSJ supported | Exon |
circRNA 5': GGU-------------------UUCCGAUGGCACCU-----GUGUCAAGGUCUUCCAACAACUCC 3' ||| ||||:| :|| || |:|: || ||| ||||| target 3':ACCACUGAACUUGAACGUAUAGCAAGGUU-UCGA-GAGUUUCCGCG---CCUGAAUCCCUUUGAGU 5' |
-17.50 | 3 | RIC-seq |
| chrX:139865340:139865390:[+] | chrX:139816079:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUUCCAAC-AACUCCGGGUCUUCCA 3' |||: | ||||| :|||: || ||: || || :|| |||||| target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCG------UGCUUCGGG---AGAAGG 5' |
-29.00 | 1 | RIC-seq |
| chrX:139865340:139865398:[+] | chrX:139816065:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUUCCAACAAC-UCCGGGUCUUCCAGCGACUUC 3' |||: | ||||| :|||: || ||: | | ||| : |||| || |||: target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCGUGCUUCGGGAGAAGGGUAAGAA---CG-UGAGA 5' |
-31.10 | 2 | RIC-seq |
| chrX:139865340:139865404:[+] | chrX:139816086:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCU 3' |||: | ||||| :|||: || ||: :||| ||:| target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCG------------------------UGCU-----UCGG 5' |
-23.80 | 1 | RIC-seq |
| chrX:139865340:139865405:[+] | chrX:139816084:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUU 3' |||: | ||||| :|||: || ||: :||| ||:|: target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCG------------------------UGCU-----UCGGGA 5' |
-24.90 | 1 | RIC-seq |
| chrX:139865340:139865407:[+] | chrX:139816082:139816123:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUUCC-GAUGGCACCUGUGU-CAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCC 3' |||: | ||||| :|||: || ||: :||| ||:|:|| target 3':ACCAGUGAUCCACCGUUUGCACGUGUCCCG------------------------UGCU-----UCGGGAGA 5' |
-28.70 | 1 | RIC-seq |
| chrX:139865341:139865370:[+] | chrX:139816051:139816084:[+] | nonBSJ supported | Exon |
circRNA 5':GUUUCCGAUG---GCAC-CUGUGUCAAGGUCUUC 3' ||||| || |||| |||: || ::||||| target 3':AGAAGGGUAAGAACGUGAGACG-AGAGUUAGAAGG 5' |
-23.60 | 1 | RIC-seq |
| chrX:139865341:139865381:[+] | chrX:139816041:139816084:[+] | nonBSJ supported | Exon |
circRNA 5':GUUUCCGAUG---GCAC-CUGUGUCAAGGUCUUCCAACAACUCCG 3' ||||| || |||| |||: || ::||||||| | |||| target 3':AGAAGGGUAAGAACGUGAGACG-AGAGUUAGAAGGUAGAGGAGGA 5' |
-37.30 | 1 | RIC-seq |
| chrX:139865341:139865381:[+] | chrX:139816042:139816084:[+] | nonBSJ supported | Exon |
circRNA 5':GUUUCCGAUG---GCAC-CUGUGUCAAGGUCUUCCAACAACUCCG 3' ||||| || |||| |||: || ::||||||| | |||| target 3':AGAAGGGUAAGAACGUGAGACG-AGAGUUAGAAGGUAGAGGAGG 5' |
-37.60 | 2 | RIC-seq |
| chrX:139865346:139865352:[+] | chrX:139854392:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC 3' ||||| target 3':CCUACCA 5' |
-7.00 | 2 | RIC-seq |
| chrX:139865346:139865355:[+] | chrX:139854504:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC 3' ||:::||| target 3':ACUGUUGUG 5' |
-9.00 | 4 | RIC-seq |
| chrX:139865346:139865360:[+] | chrX:139854497:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGU 3' ||:::||| ||||| target 3':ACUGUUGUGCACACAC 5' |
-15.40 | 1 | RIC-seq |
| chrX:139865346:139865360:[+] | chrX:139854499:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGU 3' ||:::||| |||| target 3':ACUGUUGUGCACAC 5' |
-14.00 | 3 | RIC-seq |
| chrX:139865346:139865361:[+] | chrX:139854497:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUC 3' ||:::||| ||||| target 3':ACUGUUGUGCACACAC 5' |
-15.70 | 5 | RIC-seq |
| chrX:139865346:139865365:[+] | chrX:139854488:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GG 3' ||:::||| |||| |||| || target 3':ACUGUUGUGCACACACUAGUUACCG 5' |
-17.20 | 1 | RIC-seq |
| chrX:139865346:139865367:[+] | chrX:139854487:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUC 3' ||:::||| |||| |||| ||: target 3':ACUGUUGUGCACACACUAGUUACCGA 5' |
-19.70 | 5 | RIC-seq |
| chrX:139865346:139865367:[+] | chrX:139854488:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUC 3' ||:::||| |||| |||| ||: target 3':ACUGUUGUGCACACACUAGUUACCG 5' |
-19.10 | 2 | RIC-seq |
| chrX:139865346:139865368:[+] | chrX:139854373:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUCU 3' ||||| || || || || :|| target 3':CCUACCACUGAACUUGAAC-GUA-UAGC 5' |
-8.30 | 6 | RIC-seq |
| chrX:139865346:139865368:[+] | chrX:139854493:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCU 3' ||:::||| ||||| |:|| target 3':ACUGUUGUGCACACA---CUAGU 5' |
-18.40 | 5 | RIC-seq |
| chrX:139865346:139865371:[+] | chrX:139854370:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCC 3' ||||| || || || || :|| ||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAG 5' |
-9.30 | 3 | RIC-seq |
| chrX:139865346:139865372:[+] | chrX:139854369:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCA 3' ||||| || || || || :|| |||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGG 5' |
-13.50 | 1 | RIC-seq |
| chrX:139865346:139865373:[+] | chrX:139854366:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAA 3' ||||| || || || || :|| |||||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUU 5' |
-14.50 | 1 | RIC-seq |
| chrX:139865346:139865374:[+] | chrX:139854366:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAAC 3' ||||| || || || || :|| |||||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUU 5' |
-15.00 | 9 | RIC-seq |
| chrX:139865346:139865377:[+] | chrX:139854473:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUCUUC----CAACAAC 3' ||:::||| |||| |||| ||: |||||| target 3':ACUGUUGUGCACACACUAGUUACCGACGUCUCCGUUGUUA 5' |
-22.00 | 9 | RIC-seq |
| chrX:139865346:139865377:[+] | chrX:139854474:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUCUUC----CAACAAC 3' ||:::||| |||| |||| ||: |||||| target 3':ACUGUUGUGCACACACUAGUUACCGACGUCUCCGUUGUU 5' |
-21.90 | 2 | RIC-seq |
| chrX:139865346:139865380:[+] | chrX:139854362:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAACUCC 3' ||||| || || || || :|| |||||| ||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUC-GAG 5' |
-16.80 | 2 | RIC-seq |
| chrX:139865346:139865382:[+] | chrX:139854358:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAACUC-CGG 3' ||||| || || || || :|| |||||| ||| |: target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUC-GAGAGUU 5' |
-17.40 | 5 | RIC-seq |
| chrX:139865346:139865382:[+] | chrX:139854359:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAACUC-CGG 3' ||||| || || || || :|| |||||| ||| |: target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUC-GAGAGU 5' |
-17.20 | 2 | RIC-seq |
| chrX:139865346:139865383:[+] | chrX:139854466:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUCUUC----CAACAACUCCGGG 3' ||:::||| |||| |||| ||: |||||| |::| target 3':ACUGUUGUGCACACACUAGUUACCGACGUCUCCGUUGUUAUUGUUCG 5' |
-23.40 | 2 | RIC-seq |
| chrX:139865346:139865384:[+] | chrX:139854353:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGU 3' ||||| || || || || :|| |||||| ||| :||: target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCGC 5' |
-20.60 | 2 | RIC-seq |
| chrX:139865346:139865385:[+] | chrX:139854353:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGUC 3' ||||| || || || || :|| |||||| ||| :||: target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCGC 5' |
-20.90 | 8 | RIC-seq |
| chrX:139865346:139865385:[+] | chrX:139854465:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUCUUC----CAACAACUCCGGGUC 3' ||:::||| |||| |||| ||: |||||| |::|: target 3':ACUGUUGUGCACACACUAGUUACCGACGUCUCCGUUGUUAUUGUUCGU 5' |
-25.70 | 5 | RIC-seq |
| chrX:139865346:139865385:[+] | chrX:139854479:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUC 3' ||:::||| ||||| |:|| :||: target 3':ACUGUUGUGCACACA---CUAGUUACCGACGUC--UCCG 5' |
-19.90 | 1 | RIC-seq |
| chrX:139865346:139865394:[+] | chrX:139854350:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGUCUUCCAGCGA 3' ||||| || || || || :|| |||||| ||| :||: ||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCG------CGCC 5' |
-23.20 | 1 | RIC-seq |
| chrX:139865346:139865395:[+] | chrX:139854455:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACC--UGUG-UCAA-GGUCUUC----CAACAACUCCGGGUCUUCCAGCGAC 3' ||:::||| |||| |||| ||: |||||| |::|: |:|:| target 3':ACUGUUGUGCACACACUAGUUACCGACGUCUCCGUUGUUAUUGUUCGUCUUCUUGUUC 5' |
-27.80 | 1 | RIC-seq |
| chrX:139865346:139865395:[+] | chrX:139854475:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGAC 3' ||:::||| ||||| |:|| ||: ||:|| target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUGU 5' |
-22.50 | 5 | RIC-seq |
| chrX:139865346:139865396:[+] | chrX:139854475:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGACU 3' ||:::||| ||||| |:|| ||: ||:|| target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUGU 5' |
-23.70 | 2 | RIC-seq |
| chrX:139865346:139865396:[+] | chrX:139854476:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGACU 3' ||:::||| ||||| |:|| ||: ||:|| target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUG 5' |
-23.70 | 3 | RIC-seq |
| chrX:139865346:139865398:[+] | chrX:139854345:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGUCUUCCAGC-GACUUC 3' ||||| || || || || :|| |||||| ||| :||: || ||||| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCG------CGCCUGAAU 5' |
-25.50 | 8 | RIC-seq |
| chrX:139865346:139865402:[+] | chrX:139854331:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGUCUUCCAGC-GACU---------UCAAGU 3' ||||| || || || || :|| |||||| ||| :||: || |||| ||||:| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCG------CGCCUGAAUCCCUUUGAGUUUAA 5' |
-26.00 | 1 | RIC-seq |
| chrX:139865346:139865403:[+] | chrX:139854332:139854398:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGC-ACCUG----UGUCAAGGUC-UUCCAACAA-CUCC-GGGUCUUCCAGC-GACU---------UCAAGUC 3' ||||| || || || || :|| |||||| ||| :||: || |||| ||||:| target 3':CCUACCACUGAACUUGAAC-GUA-UAGCAAGGUUUCGAGAGUUUCCG------CGCCUGAAUCCCUUUGAGUUUA 5' |
-25.80 | 1 | RIC-seq |
| chrX:139865346:139865403:[+] | chrX:139854465:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGACUU---CAAGUC 3' ||:::||| ||||| |:|| ||: ||:|| ||||: target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUGUUAUUGUUCGU 5' |
-27.40 | 3 | RIC-seq |
| chrX:139865346:139865403:[+] | chrX:139854466:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGACUU---CAAGUC 3' ||:::||| ||||| |:|| ||: ||:|| ||||: target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUGUUAUUGUUCG 5' |
-27.00 | 1 | RIC-seq |
| chrX:139865346:139865413:[+] | chrX:139854455:139854512:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCA-GCGACUU---CAAGUCUUCCAAUAAU 3' ||:::||| ||||| |:|| ||: ||:|| ||||: ||:|| target 3':ACUGUUGUGCACACA---CUAGUUA-----------CCGACGUCUCCGUUGUUAUUGUUCGUCUUCUUGUUC 5' |
-28.00 | 6 | RIC-seq |
| chrX:139865346:139865427:[+] | chrX:139816068:139816115:[+] | nonBSJ supported | Exon |
circRNA 5':CGAUGGCACCUGUGU-CAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCCAAUAAUCUCAAGGUCUUCCA 3' | ||||| :|||: || ||: :||| ||:|:|| ||:|| |||| || target 3':UCCACCGUUUGCACGUGUCCCG------------------------UGCU-----UCGGGAGA-----AGGGUA--AGAACGUG 5' |
-28.00 | 1 | RIC-seq |
| chrX:139865350:139865398:[+] | chrX:139854386:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUC 3' ||| ||: ||||: |:|| | ||||| target 3': UGUCCUCCAUCGUUCUUU------------GUCCUAC----CACUGAAC 5' |
-10.10 | 25 | RIC-seq |
| chrX:139865350:139865404:[+] | chrX:139854373:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUCU 3' ||| ||: ||||: |||| || | ||| :|||| || :|| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGC 5' |
-12.80 | 9 | RIC-seq |
| chrX:139865350:139865404:[+] | chrX:139854374:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUCU 3' ||| ||: ||||: |||| || | ||| :|||| || :|| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAG 5' |
-12.60 | 3 | RIC-seq |
| chrX:139865350:139865407:[+] | chrX:139854370:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCC 3' ||| ||: ||||: |||| || | ||| :|||| || :|| ||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAG 5' |
-13.80 | 1 | RIC-seq |
| chrX:139865350:139865409:[+] | chrX:139854378:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAAGUCUUCCAA 3' ||| ||: ||||: |:|| | ||||| ||| || target 3': UGUCCUCCAUCGUUCUUU------------GUCCUAC----CACUGAACUU--GAACGU 5' |
-10.60 | 2 | RIC-seq |
| chrX:139865350:139865410:[+] | chrX:139854366:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAU 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUU 5' |
-19.60 | 2 | RIC-seq |
| chrX:139865350:139865410:[+] | chrX:139854367:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAU 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUU 5' |
-19.40 | 4 | RIC-seq |
| chrX:139865350:139865417:[+] | chrX:139854360:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUCA 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| |||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUCGAGAG 5' |
-26.10 | 1 | RIC-seq |
| chrX:139865350:139865417:[+] | chrX:139854362:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUCA 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| ||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUC--GAG 5' |
-22.20 | 2 | RIC-seq |
| chrX:139865350:139865418:[+] | chrX:139854357:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUCAA 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| |||||| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUCGAGAGUUU 5' |
-27.10 | 1 | RIC-seq |
| chrX:139865350:139865420:[+] | chrX:139854355:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUCAAGG 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| ||||||:| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUCGAGAGUUUCC 5' |
-30.40 | 1 | RIC-seq |
| chrX:139865350:139865421:[+] | chrX:139854355:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUCAAGGU 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| ||||||:| target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUCGAGAGUUUCC 5' |
-31.10 | 2 | RIC-seq |
| chrX:139865350:139865422:[+] | chrX:139854353:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':GGCACCU-GUGUCAAGGUCUUCCAACAACUCCGG-GUCUUCCAGCGACUU-CAAGUC-UUCCAAUAAUCUC-AAGGUC 3' ||| ||: ||||: |||| || | ||| :|||| || :|| |||||| |||| ||||: target 3': UGUCCUCCAUCGUUCU------UUGUCCUA-CCACUGAAC----UUGAACGUAUAGCAAGGUUUCGAGAGUUUCCGC 5' |
-31.60 | 6 | RIC-seq |
| chrX:139865365:139865391:[+] | chrX:139816049:139816076:[+] | nonBSJ supported | Exon |
circRNA 5':GUCUUCCAACAA-CUCCGGGUCUUCCAG 3' |||| || ||| ::||||||| target 3':AAGAACGUGAGACGAGAGUUAGAAGGUA 5' |
-18.90 | 2 | RIC-seq |
| chrX:139865376:139865399:[+] | chrX:139816042:139816064:[+] | nonBSJ supported | Exon |
circRNA 5':ACUCCGGGUCUUCCAGCGACUUCA 3' ||| ::||||||| | ||:| target 3':CGAGAGUUAGAAGGUAGAGGAGG 5' |
-23.10 | 1 | RIC-seq |
| chrX:139865379:139865395:[+] | chrX:139854404:139854418:[+] | nonBSJ supported | Exon |
circRNA 5':CCGGGUCUUCCAGCGAC 3' |:|| |||:| target 3':UGUCCUCCA--UCGUUC 5' |
-8.30 | 9 | RIC-seq |
| chrX:139865379:139865441:[+] | chrX:139854406:139854471:[+] | nonBSJ supported | Exon |
circRNA 5':CCGGGUCUUCCAGCGACUU------CAAGUCU--UCCAAUAAUCUCAAGGUCUUC-CAGAUAAUCCUGAGCU 3' |::|: |:|:| ||||| :|||| ||||||| || ||| target 3':UGUUCGUCUUCUUGUUCUCAUCUUUGUUCACAUUGGGUUUACAA----CCAGAAGAGUGUCCUCCA--UCGU 5' |
-22.90 | 1 | RIC-seq |
| chrX:139865381:139865400:[+] | chrX:139854311:139854322:[+] | nonBSJ supported | Exon |
circRNA 5':GGGUCUUCCAGCGACUU-CAA 3' ||| ||||| || target 3':ACCA--------CUGAACGU 5' |
-6.20 | 2 | RIC-seq |
| chrX:139865415:139865446:[+] | chrX:139854378:139854408:[+] | nonBSJ supported | Exon |
circRNA 5':UCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAG 3' ||||: | |||:||| || target 3':CGUUCUUUGUCCUACCACUGAACUUGAACGU 5' |
-10.60 | 1 | RIC-seq |
| chrX:139865635:139865682:[+] | chrX:139854272:139854322:[+] | nonBSJ supported | Exon |
circRNA 5':AGGU--CUUCCAUCAAAUACA-GAUCUUCCAGCUAAUCCAUGUCUUC--CAGA 3' ||| ||| || |||| |:|| ||| ||| target 3':ACCACUGAACGUCAACACUUCGCUAGCACCUUGAGUCCU--CAGUUCCAGUCC 5' |
-12.30 | 2 | RIC-seq |
| chrX:139865821:139865872:[+] | chrX:139798300:139798345:[+] | nonBSJ supported | Exon |
circRNA 5': CCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUACGUCU-UCCACCA 3' ||||: |||: |||::| ||||| :|||||| |||||| target 3':CGGUCUCAACAUCGAGUU-GUCGUAC-----CUUUUC--GUGCAGACAGGUGGC 5' |
-33.30 | 2 | RIC-seq |
| chrX:139865970:139866036:[+] | chrX:139798302:139798351:[+] | nonBSJ supported | Exon |
circRNA 5':AUGUCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUCC-CAGUCUUCCAGAAAAUCCACGUCUUCCCAA 3' ||| ||||| ||| ||| |||: ||||| ||||||| ||| target 3':AACAUCCGGUCUCAA-------------CAUC-GAGUUGUCGUAC---CUUUUC-GUGCAGACAGGUG 5' |
-24.70 | 1 | RIC-seq |
| chrX:139865997:139866036:[+] | chrX:139798302:139798337:[+] | nonBSJ supported | Exon |
circRNA 5':AGUAACCUCC-CAGUCUUCCAGAAAAUCCACGUCUUCCCAA 3' ||| ||| |||: ||||| ||||||| ||| target 3':ACAUC-GAGUUGUCGUAC---CUUUUC-GUGCAGACAGGUG 5' |
-21.30 | 1 | RIC-seq |
| chrX:139866162:139866185:[+] | chrX:139854356:139854387:[+] | nonBSJ supported | Exon |
circRNA 5': GAAAAUCCUUGUC-UUCC------CUUAAAU 3' ||| |:|| |||| ||:||| target 3':ACUUGAACGUAUAGCAAGGUUUCGAGAGUUUC 5' |
-10.00 | 1 | RIC-seq |
| chrX:139866189:139866226:[+] | chrX:139854262:139854304:[+] | nonBSJ supported | Exon |
circRNA 5':UAGCU-UCCAAAAAAUCCGG-GUCUUC--CAGGAAAUC-CGUG 3' ||| || || || ||| |||| ||| ||: target 3':UUCGCUAGCACCUUGAGUCCUCAGUUCCAGUCCGAUAGUGCGA 5' |
-20.10 | 1 | RIC-seq |
| chrX:139866205:139866227:[+] | chrX:139854300:139854322:[+] | nonBSJ supported | Exon |
circRNA 5':CGG-GUCUUCCAGGAAAUCCGUGU 3' || | ||| ||| |:| target 3':ACCACUGAACGUCAACACUUCGC 5' |
-9.40 | 1 | RIC-seq |
| chrX:139866205:139866235:[+] | chrX:139854285:139854322:[+] | nonBSJ supported | Exon |
circRNA 5':CGG-GUCUUCCAG----GAAAUC--CGUGUCUUCCAGC 3' || | ||| ||| ||| |||| ||| target 3':ACCACUGAACGUCAACACUUCGCUAGCACCUUGAGUCC 5' |
-11.40 | 1 | RIC-seq |
| chrX:139866622:139866638:[+] | chrX:139816041:139816058:[+] | nonBSJ supported | Exon |
circRNA 5': GUCUUCCAGCAUCUCCA 3' |||||||| | :|||| target 3':UUAGAAGGUAGAGGAGGA 5' |
-19.10 | 2 | RIC-seq |
| chrX:139866667:139866725:[+] | chrX:139798363:139798426:[+] | nonBSJ supported | Exon |
circRNA 5':CAUCUCCACGUCU--UCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGU-CUUCCA-ACAA-CU 3' |:|| || :|||| || |||| || || |||| || target 3':CUGGAACUA-AGUUUGGGUCAAUCAUACCCAGAUCUCCGGAACGACCAUUGAUAAUGUGUUCGAC 5' |
-13.90 | 1 | RIC-seq |
| chrX:139866681:139866716:[+] | chrX:139798394:139798440:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGCA----------UCUCUGUGUCU--UCCAGCAUCUUCAUGUCUU 3' ||||| :|| || || :|||| |||| target 3':AGUCGUUCCCUGCCCUGGA-ACUAAGUUUGGGUCAAUCAUACCCAGAU 5' |
-15.40 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:139795654:139795722:[+] | target | - | chrX:139795664-139795665 | G>A | LAML-KR | ICGC |
| chrX:139795654:139795722:[+] | target | - | chrX:139795708-139795709 | A>G | PACA-CA | ICGC |
| chrX:139795685:139795719:[+] | target | - | chrX:139795708-139795709 | A>G | PACA-CA | ICGC |
| chrX:139795688:139795715:[+] | target | - | chrX:139795708-139795709 | A>G | PACA-CA | ICGC |
| chrX:139795688:139795724:[+] | target | - | chrX:139795708-139795709 | A>G | PACA-CA | ICGC |
| chrX:139795699:139795719:[+] | target | - | chrX:139795708-139795709 | A>G | PACA-CA | ICGC |
| chrX:139854262:139854304:[+] | target | - | chrX:139854264-139854265 | C>T | PRAD-CA | ICGC |
| chrX:139854262:139854304:[+] | target | - | chrX:139854296-139854297 | C>T | PRAD-CA | ICGC |
| chrX:139854272:139854322:[+] | target | - | chrX:139854296-139854297 | C>T | PRAD-CA | ICGC |
| chrX:139854274:139854304:[+] | target | - | chrX:139854296-139854297 | C>T | PRAD-CA | ICGC |
| chrX:139854285:139854322:[+] | target | - | chrX:139854296-139854297 | C>T | PRAD-CA | ICGC |
| chrX:139865898:139865928:[+] | circRNA | - | chrX:139865903-139865904 | C>T | LINC-JP | ICGC |