Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866107:139866141:[+] chr1:208016712:208016768:[-] nonBSJ supported Intron

circRNA 5': GAAAAU-CCACA--------------------UCUUCCAAUGGCCUCCAGGUCUUC 3'


            |||| ||||| ||| || || |||||||||


target  3':UCUUUAGCGGUGUGAGUAUAAACUCGUUCACGUAGACAGUGUACGUUGGUCCAGAAA 5'

 -26.50 3 RIC-seq
chrX:139866107:139866161:[+] chr1:208016712:208016760:[-] nonBSJ supported Intron

circRNA 5': GAAAAU-CCACAUCUUCCAAUGGCCUC-CAGGUCUUCCAGACUAUC-CAUGUCUUCCA 3'


            |||| ||||| ||: ||: ||:|| || || || |||| | ||


target  3':UCUUUAGCGGUGU-GAG---UAUAAACUCGUUCAC---GUA-GACAGUGUAC-GUUGG 5'

 -19.80 3 RIC-seq