Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865388:139865445:[+]	chr2:232325087:232325130:[-]	nonBSJ supported	Exon	circRNA 5':CCAGCG-ACUUCAAGUCUUCCAAUAAUCUCAAGGUCUUCCAG-AUAAUCCUGAGCUUCCA 3' \|\|\|\|: \|\|\| \|\|\| \|\|\|: \|\| \|\|\|\| \|\| \|\|\| \|\| \|:\|\| \|:\|\| target 3':AGUCGUGUGAUGUUAC-------AUUGUAG-UCCA-AA-GUCAUA-----AUUC-AGGGA 5'	-19.90	2	RIC-seq
chrX:139866495:139866501:[+]	chr2:232325125:232325130:[-]	nonBSJ supported	Exon	circRNA 5':CGUCUUC 3' \|\|\|:: target 3': CAGGGA 5'	-3.60	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr2:232325087:232325130:[-]	target	-	chr2:232325118-232325119	G>C	EOPC-DE	ICGC