Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866526:139866570:[+] chr18:54951880:54951920:[-] nonBSJ supported Exon

circRNA 5':AGCCAUGU----CUUCCAGAAAAUCCACGUC-UUCCAGAAAAUAUAUGUC 3'


            ||||||: |||| || :|| |||||: |||||


target  3': CGGUACGAUUAGAAG-------AGACAUAGCAAGGUUAAAAUCAUACA 5'

 -20.10 12 RIC-seq
chrX:139866533:139866570:[+] chr18:54951889:54951920:[-] nonBSJ supported Exon

circRNA 5': UCUUCCAGAAAAUCCACGUC-UUCCAGAAAAUAUAUGUC 3'


            ||||| || :|| |||||: |||||


target  3':UAGAAG-------AGACAUAGCAAGGUUAAAAUCAUACA 5'

 -12.00 1 RIC-seq