Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865876:139865887:[+] chr1:173761008:173761017:[+] nonBSJ supported Exon

circRNA 5':CCAGGUCUUCCA 3'


            |||: || ||


target  3':CGUCU-GACGG 5'

 -6.90 1 RIC-seq
chrX:139865904:139865929:[+] chr1:173761008:173761024:[+] nonBSJ supported Exon

circRNA 5':CGGAAAAAAUCCAGGUCUUCCAGCCA 3'


            ||||| |||: || |||


target  3':UUCUUUCC---GUCU-GA----CGG 5'

 -8.50 23 RIC-seq
chrX:139865942:139865964:[+] chr1:173761012:173761027:[+] nonBSJ supported Exon

circRNA 5':CUGAAGAUCCACGUCUUCCAGAA 3'


            |:|||| ||||


target  3':AAUUUCUUUCC-------GUCUG 5'

 -5.00 2 RIC-seq