Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865581:139865610:[+] chr16:3136254:3136280:[+] nonBSJ supported Exon

circRNA 5':AUCUUCCAGGAAAAUCCACGUCUUC--CAGGA 3'


            ||::||| ||||: ||||


target  3': AGGGGGUGAU----GGUGUUUAAUACGUCCG 5'

 -17.40 1 RIC-seq
chrX:139866533:139866559:[+] chr16:3136255:3136279:[+] nonBSJ supported Exon

circRNA 5':UCUUCCAGAAAAUCCACGUCUUC--CAGA 3'


            |::||| ||||: |||


target  3': GGGGGUGAU---GGUGUUUAAUACGUCC 5'

 -12.90 1 RIC-seq