Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865551:139865568:[+] chr20:36757520:36757537:[-] nonBSJ supported 3UTR

circRNA 5':CAGCAAUUACUGGUCUUC 3'


            |||| ||| |:|


target  3':CUCGUCCCUCACCUGGAA 5'

 -8.60 5 RIC-seq
chrX:139865633:139865643:[+] chr20:36757508:36757517:[-] nonBSJ supported 3UTR

circRNA 5':CAAGGUCUUCC 3'


            |||| ||||


target  3':AUUCC-GAAGC 5'

 -8.60 22 RIC-seq
chrX:139865651:139865666:[+] chr20:36757712:36757726:[-] nonBSJ supported 3UTR

circRNA 5':ACAGAUCUUCCAG-CUA 3'


            ||| ||::|||| |:


target  3':GGUC-AGGGGGUCAGG 5'

 -16.00 1 RIC-seq
chrX:139865651:139865666:[+] chr20:36757712:36757727:[-] nonBSJ supported 3UTR

circRNA 5':ACAGAUCUUCCAG-CUA 3'


            ||| ||::|||| |:


target  3':GGUC-AGGGGGUCAGGG 5'

 -16.40 5 RIC-seq