Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866576:139866628:[+]	chr14:103399865:103399925:[-]	nonBSJ supported	3UTR	circRNA 5':ACUAA-GCUACGUCUUCC---------AACAAAUCCAUGUCUUCCUAUAUCUCCAGGUCUUCC 3' \|\|\| \|\|:\|\|\| \|\|\| \|\|\| \|\|:\| \|\|\| \|\|\|\|\|\| target 3':AGAUGACGGUGCUUGUUACGCCGUAUUUUGACUAGUUAUAAUAU--UAUUUCUAAACAGAAGA 5'	-16.20	1	RIC-seq
chrX:139866620:139866657:[+]	chr14:103399862:103399896:[-]	nonBSJ supported	3UTR	circRNA 5':AGGUCUUCCAGCAUCUCCA-GGGCUUC-CAGCAUCU-GCUC 3' \|\|\|\|\| :\| \|\|\| \|::\| \| \|\|\|\| :\|\| target 3':ACCAGA----UGAC--GGUGCUUGUUACGCCGUAUUUUGAC 5'	-15.30	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866576:139866628:[+]	circRNA	-	chrX:139866592-139866593	C>A	LICA-CN	ICGC