5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865820:139865848:[+] | chr12:88520092:88520118:[-] | nonBSJ supported | 5UTR |
circRNA 5':UCCAGGUCUUCCAGUCAGUCAGUGUCUUC 3' || |: ||:|| :| ||| target 3': GGA-CGACAUCUCGGUAUUGUAAUGAAA 5' |
-7.80 | 2 | RIC-seq |
| chrX:139865956:139865999:[+] | chr12:88454736:88454771:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAGAAAAUCCA-UGUCUUCCAGAAAAUCCAUGUCUUCCAGU 3' |||||| |||||| ||||: ||| |||| target 3': AAGGUCAAGACCCUAACAGAA--------AGGUGAAGAUGGUCU 5' |
-24.70 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr12:88454736:88454771:[-] | target | 2007026 | chr12:88454750-88454751 | TTG>T | Joubert_syndrome|Meckel-Gruber_syndrome|Nephronophthisis | ClinVar |
| chr12:88454736:88454771:[-] | target | 2944685 | chr12:88454768-88454769 | C>CA | Joubert_syndrome|Nephronophthisis|Meckel-Gruber_syndrome | ClinVar |
| chr12:88520092:88520118:[-] | target | 1511949 | chr12:88520092-88520093 | C>G | Nephronophthisis|Meckel-Gruber_syndrome|Joubert_syndrome | ClinVar |
| chr12:88520092:88520118:[-] | target | 2034576 | chr12:88520092-88520093 | C>T | Joubert_syndrome|Meckel-Gruber_syndrome|Nephronophthisis | ClinVar |
| chr12:88520092:88520118:[-] | target | 3241102 | chr12:88520095-88520096 | GC>G | Bardet-Biedl_syndrome_14 | ClinVar |
| chr12:88520092:88520118:[-] | target | 1073200 | chr12:88520098-88520099 | G>A | Bardet-Biedl_syndrome_14|Meckel_syndrome,_type_4|Joubert_syndrome_5|Senior-Loken_syndrome_6|Leber_congenital_amaurosis_10|Joubert_syndrome|Meckel-Gruber_syndrome|Nephronophthisis | ClinVar |
| chr12:88520092:88520118:[-] | target | 3575479 | chr12:88520115-88520116 | CT>C | Joubert_syndrome_5|Bardet-Biedl_syndrome_14|Meckel_syndrome,_type_4|Senior-Loken_syndrome_6|Leber_congenital_amaurosis_10 | ClinVar |