Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866349:139866373:[+] chr14:51080033:51080064:[+] nonBSJ supported CDS

circRNA 5':CGUGUC-UUCCA--------GCAAAUCCA-CGUCU 3'


            |:|| ||||| ||| ||| |:||


target  3':CCGCAAAAAGGUUCUUAAACCGU---GGUGGUAGC 5'

 -15.10 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr14:51080033:51080064:[+] target 1017361 chr14:51080062-51080063 G>A Spastic_paraplegia|Hereditary_spastic_paraplegia_3A ClinVar
chr14:51080033:51080064:[+] target 859493 chr14:51080062-51080063 G>T Hereditary_spastic_paraplegia_3A ClinVar