Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866621:139866648:[+] chr12:104715827:104715850:[+] nonBSJ supported Intron

circRNA 5':GGUCUUCCAGCAUCUCCAGGGCUUCCAG 3'


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target  3': UAGAUAGUCGUAA---UCCUCUAGGUA 5'

 -19.30 1 RIC-seq
chrX:139866621:139866653:[+] chr12:104715823:104715850:[+] nonBSJ supported Intron

circRNA 5':GGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCU 3'


            |||| |||||| |||: |||| ||


target  3': UAGAUAGUCGUAA---UCCUCUAGGUAUCAG 5'

 -20.20 3 RIC-seq