Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866759:139866783:[+] chr2:69597140:69597157:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCAACGUCUCCAGUGUGCUG 3'


            ||||| |||||||: ||


target  3':AAGAAGU------AGGUCACG-GAA 5'

 -15.10 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr2:69597140:69597157:[-] target 1804723 chr2:69597145-69597146 C>A Congenital_myasthenic_syndrome ClinVar
chr2:69597140:69597157:[-] target 540352 chr2:69597147-69597148 T>C Congenital_myasthenic_syndrome_12|Inborn_genetic_diseases ClinVar
chr2:69597140:69597157:[-] target 583230 chr2:69597154-69597155 CCTTAA>C Congenital_myasthenic_syndrome_12 ClinVar