Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866614:139866651:[+] chr9:113637953:113637989:[-] nonBSJ supported CDS

circRNA 5':AUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAU 3'


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target  3':CAGAUCUUCAUUGUUUUGGUUAGGUCCUC-AGGUCGUC 5'

 -26.90 14 RIC-seq
chrX:139866615:139866651:[+] chr9:113637953:113637989:[-] nonBSJ supported CDS

circRNA 5': UCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAU 3'


            ||| |:|| |:| ||||||: |||||||


target  3':CAGAUCUUCAUUGUUUUGGUUAGGUCCUC-AGGUCGUC 5'

 -26.80 2 RIC-seq