5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA 3' interaction region | CircRNA 5' interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| - | chrX:139865363:139865386:[+] | chr18:74692148:74692169:[-] | BSJ supported | 3UTR |
circRNA 5':AGGUCUUCCAACAACUCCGGGUCU 3' |:||||| ||| ||| | target 3': CUAGAAGUGUGUCUUU-CCCUGU 5' |
-14.20 | 8 | RIC-seq |
| chrX:139866774:139866824:[+] | chrX:139865339:139865354:[+] | chr18:74691562:74691624:[-] | BSJ supported | 3UTR |
circRNA 5':CAGUGUGCUGAUCUUCUGACAUUCAGGUCUUCCAGUGUCU-GCAAUA------UCCAGGGGUUUCCGA--UGGCAC 3' || | |||| :|||| ||:| ||| ||: ||||: |||||:||:: || ||:|| target 3':AUCUC-CGAC---GAGACC------CCGGU-GGU-ACGUCCCGUUGCCACUGCAGGUCUCCGGUGGACGAACUGU 5' |
-42.30 | 1 | RIC-seq |
| chrX:139866777:139866815:[+] | - | chr18:74690961:74690998:[-] | BSJ supported | 3UTR |
circRNA 5':UGUGCUGAUCUUC-UGACAUUCAGGUCUUCCAGUGUCUGC 3' || || |||| |:|| :|| :|| || || | ||: target 3':UCAAAACAAGAAACAUUGAGAGAGUAGUAGCUC-C-GAUA 5' |
-15.10 | 11 | RIC-seq |
| chrX:139866803:139866824:[+] | chrX:139865339:139865361:[+] | chr18:74728854:74728899:[-] | BSJ supported | CDS |
circRNA 5':UUCCAGUGUCUGCAAUAUCCAGGGGUUU---CCGA---UGGCACCUGUGUC 3' ||| |||||| || ||| || ||||| || ||| target 3':CGGG-CACAGAGACAC--GGAACCCUCCUUCGGUACGGACCGU--AC-CAGG 5' |
-26.00 | 10 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr18:74728854:74728899:[-] | target | - | chr18:74728866-74728867 | G>T | PACA-CA | ICGC |
| chr18:74728854:74728899:[-] | target | - | chr18:74728891-74728892 | G>T | LICA-CN | ICGC |
| chrX:139866774:139866824:[+] | circRNA | - | chrX:139866793-139866794 | C>T | LICA-CN | ICGC |
| chrX:139866777:139866815:[+] | circRNA | - | chrX:139866793-139866794 | C>T | LICA-CN | ICGC |
| chrX:139866777:139866815:[+] | circRNA | - | chrX:139866793-139866794 | C>T | LICA-CN | ICGC |