Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866359:139866375:[+] chr3:23942420:23942435:[-] nonBSJ supported CDS

circRNA 5':AGCAAAUCCACGUCUUC 3'


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target  3':CCGUCGAGGUGCGGAA 5'

 -20.00 1 RIC-seq
chrX:139866359:139866386:[+] chr3:23942420:23942446:[-] nonBSJ supported CDS

circRNA 5':AGCAAAUCCACGUCUUCCAACAAAGCCA 3'


            ||| ||||||:||||| :||


target  3':CCGUCGAGGUGCGGAAGGACAUC-UGGA 5'

 -29.50 8 RIC-seq