Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866672:139866718:[+]	chr2:178482190:178482259:[-]	nonBSJ supported	CDS	circRNA 5':CCAC-GUCUUC----------CAGCAUCUC---UGUGUCUUCCAGCAUCUUCAU------------GUCUUCC 3' \|\|\| \|:\|\|\| \|\| \|\|\|\|\|\| \|\|\|\|\|\|\|\| \|\| \|\|:\| \|\|\|\|:\| target 3':AGUGACGGAAAAACUAUCGAAGUAGUAGAGACAACACAGAA---CGAAGGACAUGAACGAACCACUCAGAGGC 5'	-30.20	6	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr2:178482190:178482259:[-]	target	-	chr2:178482221-178482222	G>A	BTCA-JP	ICGC