Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865478:139865507:[+] chr4:3225234:3225258:[+] nonBSJ supported CDS

circRNA 5':UCCGGACAAUCCAUGUCUUCCAAGAAGCUC 3'


            |||| ||: |||||| ||||


target  3': GGCCCCGACG--ACG--AGGUUCGUCGAA 5'

 -19.40 2 RIC-seq
chrX:139866638:139866667:[+] chr4:3131102:3131127:[+] nonBSJ supported Exon

circRNA 5':AGGGCUUCCAGCAUCUGCUCGUCUUCCAAC 3'


            ||:|| |||||| ||||


target  3':ACCUGAUGGUCGUUUAAUAAU----GGUUU 5'

 -19.90 2 RIC-seq