5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866689:139866750:[+] | chr19:23844915:23844962:[-] | nonBSJ supported | 5UTR |
circRNA 5':UCUGUGUCUUC---CAGCAUCUUCAUGUCUUCCAACAACUACCCAGUCUUC-CA-UCAACUGGCUCA 3' ||| | ||| || |||| ||||||| ||||| || |||| ||||| target 3':GGACCCCCAAGUAAGUGGUAG-AGUACAG-----------------AGAAGUGUCAGUUU-CCGAGA 5' |
-35.70 | 2 | RIC-seq |
| chrX:139865825:139865868:[+] | chr19:23836404:23836457:[-] | nonBSJ supported | CDS |
circRNA 5':GUCUUCCAGUCAGUCAGU-------GUCUUCCAGAAAAAU--CUACG-UCUUCC 3' |||| ||||| ||| :|| |:|| |:||: ||||| target 3':AAGAAUACAAGUCAUUCAAAACUCCUAGCCAAUUUUCGAAACGGUGUAAGAAGU 5' |
-16.40 | 1 | RIC-seq |
| chrX:139865881:139865907:[+] | chr19:23836367:23836396:[-] | nonBSJ supported | CDS |
circRNA 5': UCUUC-CAGUCAAUCCACAUC-UUCCGGA 3' ||||| || || ||||:| target 3':AAGAAGUGUAAACAUCCCAAAGAAAGGUCA 5' |
-13.70 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr19:23836404:23836457:[-] | target | - | chr19:23836410-23836411 | T>C | LINC-JP | ICGC |
| chr19:23844915:23844962:[-] | target | - | chr19:23844922-23844923 | G>A | PACA-CA | ICGC |
| chrX:139865881:139865907:[+] | circRNA | - | chrX:139865903-139865904 | C>T | LINC-JP | ICGC |