Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866142:139866178:[+] chr8:39008986:39009026:[+] nonBSJ supported CDS

circRNA 5': CAGACUAUCCAUGUCUUCCAGAAA-------AUCCUUGUCUUCC 3'


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target  3':AGUCCGA-AG--ACAGUUA-UUUUUAACGUUAUAGUAACAGAAGU 5'

 -17.10 33 RIC-seq
chrX:139866152:139866178:[+] chr8:39008986:39009018:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGAAA-------AUCCUUGUCUUCC 3'


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target  3':GACAGUUA-UUUUUAACGUUAUAGUAACAGAAGU 5'

 -14.30 4 RIC-seq