Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865492:139865506:[+] chr14:102517098:102517111:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAAGAAGCU 3'


            ||:|| ||| |||


target  3':AAGGAGUUUCCUCG 5'

 -11.00 26 RIC-seq
chrX:139866063:139866102:[+] chr14:102517034:102517064:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCU 3'


            |||||| ||:|| ||:||| :|| |||


target  3':AGGAAGGUUAA--AGGUGGUGAGGGU-----UGG--CAGU 5'

 -23.00 1 RIC-seq
chrX:139866347:139866373:[+] chr14:102517034:102517050:[+] nonBSJ supported 3UTR

circRNA 5':UCCGUGUCUUCCAGCAAAUCCACGUCU 3'


            ||: ||:|||:| ||||


target  3':UGGU---GAGGGUUG-------GCAGU 5'

 -14.60 1 RIC-seq
chrX:139866352:139866380:[+] chr14:102517038:102517064:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAGCAAAUCCACGUCUUCCAACA 3'


            |||||||: ||||| ||:|||||


target  3':AGGAAGGUUAA--AGGUGGUGAGGGUUGG 5'

 -27.90 4 RIC-seq
chrX:139865415:139865445:[+] chr14:102505476:102505523:[+] nonBSJ supported CDS

circRNA 5':UCAAGGUCUUCCA----------GAUAA--------UCCUGAGC-UUCCA 3'


            || |||| |||| ||:|| |||| |:| ||||


target  3':UGUGCCAG-AGGUGGAGGACGUACUGUUACAGGCAGAGGAGUUGAAAGG 5'

 -24.30 15 RIC-seq
chrX:139865415:139865445:[+] chr14:102505477:102505523:[+] nonBSJ supported CDS

circRNA 5':UCAAGGUCUUCCA----------GAUAA--------UCCUGAGCUUCCA 3'


            || |||| |||| ||:|| |||| |:||| |


target  3':UGUGCCAG-AGGUGGAGGACGUACUGUUACAGGCAGAGGAGUUGAAAG 5'

 -21.20 1 RIC-seq
chrX:139866008:139866065:[+] chr14:102505377:102505421:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCAGAAAAUCCACGUCUUCCCAACAAUCCAAGUCUUC---CGGAUAAUUUG-GGUC 3'


            ||| ||||:|| ||:|:| || |:|| |:|| :||| :||


target  3':GCAGUAGGUUUUAC----GCGGGAAAGU-----------GGAGCAAGUCUC--GAACAUCAU 5'

 -20.30 25 RIC-seq
chrX:139866044:139866083:[+] chr14:102505391:102505421:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUCUACGUC 3'


            ||| |||::| || |: ||| |:|| |||


target  3':GCAGUAGGUUUU----ACGCG---GGAAAG-UGGA-GCAA 5'

 -19.00 1 RIC-seq
chrX:139866205:139866231:[+] chr14:102493742:102493761:[+] nonBSJ supported CDS

circRNA 5':CGGGUCUUCCAGGAAAUCCGUGUCUUC 3'


            ||:||||| ||| |||||


target  3':AUCUAGAAG------UAGUUUCAGAA 5'

 -13.40 10 RIC-seq
chrX:139866616:139866644:[+] chr14:102516136:102516161:[+] nonBSJ supported CDS

circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAGGG-CUU 3'


            ||||||: ||| :|||||||| |:


target  3':AAGGUCCGUC---UCGAGGAGGUCCCUGG 5'

 -33.10 47 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr14:102493742:102493761:[+] target - chr14:102493761-102493762 A>G LICA-CN|LAML-KR ICGC