Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865674:139865693:[+] chr7:99757524:99757542:[-] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGAAAAAUCUGUGU 3'


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target  3': GAAGGUGGAUUUAGACAUC 5'

 -17.40 18 RIC-seq
chrX:139865711:139865720:[+] chr7:99757524:99757532:[-] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGUA 3'


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target  3': GAAGGUGGA 5'

 -8.00 1 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr7:99757524:99757542:[-] target - chr7:99757535-99757536 A>C LICA-CN ICGC