Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865857:139865890:[+] chr3:107771253:107771290:[-] nonBSJ supported Exon

circRNA 5': UCUACGUCUUCCACCAAA-UCCA--GGUC-UUCCAGUC 3'


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target  3':CAGAGAAAG-AGGUGUAGUGAGGGACCCAGAAAGGUCAA 5'

 -29.40 1 RIC-seq
chrX:139865874:139865889:[+] chr3:107771283:107771303:[-] nonBSJ supported Exon

circRNA 5':AUCCAGG-UC----UUCCAGU 3'


            ||||| || :||||:


target  3':AAGGUCAAAGUUUCGAGGUUU 5'

 -11.60 1 RIC-seq