Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865827:139865872:[+]	chr9:139732352:139732404:[+]	nonBSJ supported	CDS	circRNA 5': CUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUAC--------GUCUUCCAC-CA 3' \|\|\|\|\|\|\| \|\|: \|:\| \|\|\|\|\| \|\|\|:\|\|\|\|\| \| target 3':AGAAGGUCCUUCGA-CGCC--AGGUCCGCCAGCAGUCCUUGUUUCAGGAGGUGUGA 5'	-32.10	1	RIC-seq
chrX:139865827:139865886:[+]	chr9:139732330:139732404:[+]	nonBSJ supported	CDS	circRNA 5': CUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUAC--------GUCUUCCAC-CAAAU--CCA------GGUCUUCC 3' \|\|\|\|\|\|\| \|\|: \|:\| \|\|\|\|\| \|\|\|:\|\|\|\|\| \| \|\| \|\|:\|:\|\| target 3':AGAAGGUCCUUCGA-CGCC--AGGUCCGCCAGCAGUCCUUGUUUCAGGAGGUGUGAGACCUGGCAACGACCCGGGAGA 5'	-38.90	1	RIC-seq