Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866002:139866025:[+] chr6:129636620:129636642:[+] nonBSJ supported CDS

circRNA 5':CCUCC-CAGUCUUCCAGAAAAUCCA 3'


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target  3':AGACGAGUCGGAA-GUCUCAGUGG 5'

 -16.80 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr6:129636620:129636642:[+] target 1464797 chr6:129636620-129636621 G>C LAMA2-related_muscular_dystrophy|Merosin_deficient_congenital_muscular_dystrophy ClinVar
chr6:129636620:129636642:[+] target 802263 chr6:129636624-129636625 ACT>A Merosin_deficient_congenital_muscular_dystrophy ClinVar