Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866686:139866713:[+] chr22:42059776:42059827:[+] nonBSJ supported CDS

circRNA 5':AUCUCUGUGUC-------------------------UUCCAGCAUCUUCAUGU 3'


            |||||| ||| |||||||| ||:| ||:


target  3':CGGAGAC-CAGUCAGGACCUUCACGAACCACUCCCGAAGGUCGUCGAGG-ACGA 5'

 -26.60 1 RIC-seq
chrX:139866691:139866713:[+] chr22:42059776:42059808:[+] nonBSJ supported CDS

circRNA 5':UGUGU----------CUUCCAGCAUCUUCAUGU 3'


            |||: ||||||||| ||:| ||:


target  3':UCACGAACCACUCCCGAAGGUCGUCGAGG-ACGA 5'

 -23.30 1 RIC-seq