Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866419:139866447:[+]	chr20:49191092:49191115:[+]	nonBSJ supported	CDS	circRNA 5':CUUGUGUCUUCCAACAAAGGUACGUCUUC 3' \|\|\|\|\|\|\|\|\|\| \|\|\|\|:\| \|:\|\|\|: target 3':AAACACAGAAG----UUUCUA-GUAGAGA 5'	-23.80	1	RIC-seq
chrX:139866419:139866466:[+]	chr20:49191083:49191115:[+]	nonBSJ supported	CDS	circRNA 5':CUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACGUCUUCC 3' \|\|\|\|\|\|\|\|\|\| \|\|\|\|:\| \|:\|\|\|: \|\|\|\|\| target 3':AAACACAGAAG----UUUCUA-GUAGAGAAAA----------AGAAGA 5'	-25.70	13	RIC-seq
chrX:139866419:139866480:[+]	chr20:49191069:49191115:[+]	nonBSJ supported	CDS	circRNA 5':CUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUAUGUC 3' \|\|\|\|\|\|\|\|\|\| \|\|\|\|:\| \|:\|\|\|: \|\|\|\|\| \|\|: \|\| target 3':AAACACAGAAG----UUUCUA-GUAGAGAAAA----------AGAAGAAAAACACCGGUCAU 5'	-28.30	16	RIC-seq