Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865655:139865693:[+] chr6:118314799:118314836:[+] nonBSJ supported Intron

circRNA 5':AUCUUCCAGCUAAUCCAUGUCUUCCAGAAAAAU---CUGUGU 3'


            ||||| |||| :||| ||:||


target  3':AAGAAGUCCGAUCC----UAGAUUUAAUACGAUAUUGAUACU 5'

 -11.90 2 RIC-seq
chrX:139866078:139866117:[+] chr6:118334050:118334077:[+] nonBSJ supported Intron

circRNA 5':UACGUCU-UCCAAAAAAGCCAUGUCUUCCAGAAAAUCCACA 3'


            ||:||| |||||| |||||: ||||


target  3': UGUAGAUAGGUUU-----------AAGGUUCAUU-GGUGG 5'

 -21.00 2 RIC-seq