Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866044:139866065:[+] chr7:98522828:98522849:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCGGAUA-AUUUGGGUC 3'


            |||:|||:| ||: ||:


target  3':ACAGGAGGUCCGAGUAGUACCG 5'

 -18.30 32 RIC-seq
chrX:139866044:139866072:[+] chr7:98522829:98522849:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCGGAUAAUUUGGGUCUUCCUGA 3'


            |||:|||: || || || ||


target  3':ACAGGAGGU--------CCGAGUAGUACC 5'

 -17.70 1 RIC-seq
chrX:139866044:139866072:[+] chr7:98522830:98522849:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCGGAUAAUUUGGGUCUUCCUGA 3'


            |||:|||: || || || ||


target  3':ACAGGAGGU--------CCGAGUAGUAC 5'

 -17.30 1 RIC-seq
chrX:139866742:139866784:[+] chr7:98506362:98506400:[+] nonBSJ supported CDS

circRNA 5':ACUGGCUCAAUAUCCAUGUCUUCCAACGUCU-CCAGUGUGCUGA 3'


            ||||| |||| ||| ||||:||||||


target  3':CGACCGCCU-----GUACCACGUGCUCCAGCCGGUCGCACGACA 5'

 -31.30 7 RIC-seq
chrX:139866745:139866784:[+] chr7:98506362:98506401:[+] nonBSJ supported CDS

circRNA 5':GGCUCAAUAUCCAUGUCUUCCAACGUCU-CCAGUGUGCUGA 3'


            ||| |||| ||| ||||:||||||


target  3':ACGACCGCCU-GUACCACGUGCUCCAGCCGGUCGCACGACA 5'

 -27.70 6 RIC-seq
chrX:139866755:139866784:[+] chr7:98506362:98506392:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCCAACGUCU-CCAGUGUGCUGA 3'


            |||| ||| ||||:||||||


target  3':UGUACCACGUGCUCCAGCCGGUCGCACGACA 5'

 -25.90 1 RIC-seq