Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866654:139866698:[+] chr19:11565289:11565309:[-] nonBSJ supported 3UTR

circRNA 5':GCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCUCUG-UGUCUU 3'


            ||| |||: |||||| ||:|:


target  3':AGAG-AGAG------------------------AGAGACGACGGGC 5'

 -16.80 11 RIC-seq
chrX:139866668:139866698:[+] chr19:11565292:11565309:[-] nonBSJ supported 3UTR

circRNA 5':AUCUCCACGUCUUCCAGCAUCUCUG-UGUCUU 3'


            |||| |||||| ||:|:


target  3':GAGAG--------------AGAGACGACGGGC 5'

 -15.10 2 RIC-seq